Transcript: SNHG12:5
Basic information
LNCipedia transcript ID: SNHG12:5
HGNC Gene Symbol: SNHG12
HGNC Full Gene Name:
small nucleolar RNA host gene 12
Ensembl Gene ID:
ENSG00000197989
Ensembl Transcript ID:
ENST00000461832
Location (hg38): chr1:28580359-28581857
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 675 bp
Exons: 3
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000461832; ENST00000461832.1; SNHG12-008; OTTHUMT00000010363.1
Alternative gene names: ENSG00000197989; SNHG12; ENSG00000197989.8; OTTHUMG00000003654.2; ENSG00000197989.9; ENSG00000197989.13; PNAS-123; LINC00100; ASLNC04080
RNA sequence:
Structure:
Protein coding potential
In stringent set: no
Locus conservation
Locus conservation? | ||||
---|---|---|---|---|
SNHG12:5 | no | no | no | no |
Available literature
- Liu (2017), CRISPRi-based genome-scale identification of functional long noncoding RNA loci in human cells., Science
- Ruan (2016), Long non-coding RNA small nucleolar RNA host gene 12 (SNHG12) promotes cell proliferation and migration by upregulating angiomotin gene expression in human osteosarcoma cells., Tumour Biol.
- Zhai (2015), Microarray expression profile of lncRNAs and the upregulated ASLNC04080 lncRNA in human endometrial carcinoma., Int. J. Oncol.
- Cao (2013), Analysis of long non-coding RNA expression profiles in gastric cancer., World J. Gastroenterol.
LNCipedia transcript ID history
LNCipedia version | LNCipedia transcript ID |
---|---|
1.3 | lnc-TAF12-1:4 |
3.1 | lnc-TAF12-1:4 |
4.0 | SNHG12:5 |
4.1 | SNHG12:5 |
5.0 | SNHG12:5 |
5.1 | SNHG12:5 |
5.2 | SNHG12:5 |