Transcript: LINC01664:4

Basic information

LNCipedia transcript ID: LINC01664:4 
HGNC Gene Symbol: LINC01664    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1664
Ensembl Gene ID: ENSG00000235478
Ensembl Transcript ID: ENST00000428078
Location (hg19): chr22:17602476-17611333
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 823 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000428078.4
Alternative gene names: ENSG00000235478.4; AC006946.15; LINC01664


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 4.0443 non-coding 
CPAT coding probability 10.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01664:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AC006946.15.1-2:2
4.1 lnc-AC006946.15.1-2:2
5.0 lnc-AC006946.15.1-2:2
5.1 LINC01664:2
5.2 LINC01664:4