Transcript: LINC02290:23

Basic information

LNCipedia transcript ID: LINC02290:23 
HGNC Gene Symbol: LINC02290    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2290
Ensembl Gene ID: ENSG00000258502
Ensembl Transcript ID: ENST00000556291
Location (hg19): chr14:66578349-66590477
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 557 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000556291; ENST00000556291.1; RP11-783L4.1-003; OTTHUMT00000412103.1; NONHSAT037406; ENST00000556291.5
Alternative gene names: ENSG00000258502; RP11-783L4.1; ENSG00000258502.1; OTTHUMG00000171178.1; ENSG00000258502.5; LINC02290


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -130.0137 non-coding 
CPAT coding probability 2.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02290:23 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FUT8-2:7
3.1 lnc-FUT8-2:6
4.0 lnc-FUT8-2:6
4.1 lnc-FUT8-2:6
5.0 lnc-FUT8-2:6
5.1 LINC02290:8
5.2 LINC02290:23