Transcript: lnc-LTF-1:2

Basic information

LNCipedia transcript ID: lnc-LTF-1:2 
LNCipedia gene ID: lnc-LTF-1
RefSeq ID: NR_125406
Location (hg19): chr3:46406151-46448550
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 951 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125406; NR_125406.1
Alternative gene names: LOC102724297


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.5559 non-coding 
CPAT coding probability 6.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LTF-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LTF-1:2
4.0 lnc-LTF-1:2
4.1 lnc-LTF-1:2
5.0 lnc-LTF-1:2
5.1 lnc-TMEM89-52:7
5.2 lnc-LTF-1:2