Transcript: lnc-PFKP-16:15

Basic information

LNCipedia transcript ID: lnc-PFKP-16:15 
LNCipedia gene ID: lnc-PFKP-16
Location (hg19): chr10:3954215-3978789
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2549 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000226005.3|MICT00000035936.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -17.8852 non-coding 
CPAT coding probability 20.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PFKP-16:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PFKP-16:15
5.0 lnc-PFKP-16:15
5.1 lnc-NPY4R2-502:6
5.2 lnc-PFKP-16:15