Transcript: lnc-PFKP-16:18

Basic information

LNCipedia transcript ID: lnc-PFKP-16:18 
LNCipedia gene ID: lnc-PFKP-16
Location (hg19): chr10:3985138-3988551
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 485 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000103397.1|ENCT00000043074.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -194.5132 non-coding 
CPAT coding probability 0.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PFKP-16:18 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PFKP-16:18
5.0 lnc-PFKP-16:18
5.1 lnc-NPY4R2-502:16
5.2 lnc-PFKP-16:18