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High confidence set only:
PhyloCSF score cutoff:
No Lee et Al. TIS:
No Bazzini smORFs:
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BED GTF GFF FASTA
127802 lncRNA transcripts found (6391 pages)
Transcript ID Gene ID Location (hg19) strand transcript size
lnc-TSPAN8-1:3 lnc-TSPAN8-1 chr12:71503983-71509740 - 362
lnc-TSPAN8-2:1 lnc-TSPAN8-2 chr12:72004168-72005066 - 470
lnc-TSPAN8-2:2 lnc-TSPAN8-2 chr12:72003890-72005034 - 845
lnc-TSPAN8-3:1 lnc-TSPAN8-3 chr12:72008851-72013745 - 381
lnc-TSPAN8-3:2 lnc-TSPAN8-3 chr12:72007147-72008928 - 550
lnc-TSPAN8-3:3 lnc-TSPAN8-3 chr12:72005336-72007528 - 746
lnc-TSPAN8-4:1 lnc-TSPAN8-4 chr12:71427902-71498306 - 544
lnc-TSPAN9-1:1 lnc-TSPAN9-1 chr12:3427884-3434509 + 3004
lnc-TSPAN9-1:2 lnc-TSPAN9-1 chr12:3428607-3434506 + 641
lnc-TSPAN9-1:3 lnc-TSPAN9-1 chr12:3409529-3411620 + 2092
lnc-TSPAN9-1:4 lnc-TSPAN9-1 chr12:3409529-3454218 + 22697
lnc-TSPAN9-1:5 lnc-TSPAN9-1 chr12:3409529-3454218 + 24903
lnc-TSPAN9-1:6 lnc-TSPAN9-1 chr12:3409529-3454218 + 25076
lnc-TSPAN9-1:7 lnc-TSPAN9-1 chr12:3409529-3454218 + 26176
lnc-TSPAN9-1:8 lnc-TSPAN9-1 chr12:3410489-3428718 + 2411
lnc-TSPAN9-2:1 lnc-TSPAN9-2 chr12:3578116-3578462 + 347
lnc-TSPEAR-3:1 lnc-TSPEAR-3 chr21:45893606-45894980 - 1375
lnc-TSPEAR-4:1 lnc-TSPEAR-4 chr21:45889812-45892399 - 1113
lnc-TSPO-1:1 lnc-TSPO-1 chr22:43608680-43609667 + 531
lnc-TSPO-3:1 lnc-TSPO-3 chr22:43671961-43679836 + 1951