Gene: PANTR1
Basic information
LNCipedia gene ID: PANTR1
Location (hg19): chr2:105413578-105470273
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA_gene
Transcripts: 29
Transcripts
| Transcript ID | Location (hg19) | Length |
|---|---|---|
| PANTR1:12 | chr2:105424030-105469641 | 608 bp |
| PANTR1:17 | chr2:105424030-105467934 | 699 bp |
| PANTR1:18 | chr2:105424030-105467934 | 652 bp |
| PANTR1:31 | chr2:105424038-105470273 | 1260 bp |
| PANTR1:32 | chr2:105424038-105470243 | 1202 bp |
| PANTR1:33 | chr2:105424038-105470243 | 1273 bp |
| PANTR1:34 | chr2:105413578-105470027 | 509 bp |
| PANTR1:35 | chr2:105424026-105469647 | 571 bp |
| PANTR1:36 | chr2:105424026-105469647 | 817 bp |
| PANTR1:37 | chr2:105424026-105469647 | 789 bp |
| PANTR1:38 | chr2:105424031-105469647 | 613 bp |
| PANTR1:39 | chr2:105424040-105469647 | 678 bp |
| PANTR1:40 | chr2:105424031-105469641 | 607 bp |
| PANTR1:41 | chr2:105424043-105469594 | 501 bp |
| PANTR1:42 | chr2:105424038-105468028 | 785 bp |
| PANTR1:43 | chr2:105424035-105467934 | 722 bp |
| PANTR1:44 | chr2:105421883-105467934 | 2874 bp |
| PANTR1:45 | chr2:105424030-105467919 | 637 bp |
| PANTR1:46 | chr2:105424035-105467916 | 747 bp |
| PANTR1:47 | chr2:105421977-105467916 | 2762 bp |
| PANTR1:48 | chr2:105424031-105467911 | 675 bp |
| PANTR1:49 | chr2:105424030-105467911 | 629 bp |
| PANTR1:50 | chr2:105424031-105467911 | 675 bp |
| PANTR1:51 | chr2:105424035-105467911 | 699 bp |
| PANTR1:52 | chr2:105424035-105467911 | 742 bp |
| PANTR1:53 | chr2:105424033-105461633 | 646 bp |
| PANTR1:54 | chr2:105424026-105461592 | 612 bp |
| PANTR1:55 | chr2:105424038-105446509 | 637 bp |
| PANTR1:56 | chr2:105424033-105429314 | 603 bp |
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| PANTR1 | no | no | no | no |
Available literature
- Li (2014), Increased levels of the long intergenic non-protein coding RNA POU3F3 promote DNA methylation in esophageal squamous cell carcinoma cells., Gastroenterology
- Sauvageau (2013), Multiple knockout mouse models reveal lincRNAs are required for life and brain development., Elife
- Lin (2011), RNA-Seq of human neurons derived from iPS cells reveals candidate long non-coding RNAs involved in neurogenesis and neuropsychiatric disorders., PLoS ONE