Gene: PRKCQ-AS1
Basic information
LNCipedia gene ID: PRKCQ-AS1
Location (hg19): chr10:6622361-6681743
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA_gene
Transcripts: 57
Transcripts
| Transcript ID | Location (hg19) | Length |
|---|---|---|
| PRKCQ-AS1:1 | chr10:6622361-6626247 | 1054 bp |
| PRKCQ-AS1:10 | chr10:6622470-6629063 | 3562 bp |
| PRKCQ-AS1:11 | chr10:6622488-6633030 | 5242 bp |
| PRKCQ-AS1:12 | chr10:6622573-6626106 | 850 bp |
| PRKCQ-AS1:13 | chr10:6625638-6627641 | 365 bp |
| PRKCQ-AS1:14 | chr10:6625641-6626260 | 421 bp |
| PRKCQ-AS1:15 | chr10:6625767-6633059 | 666 bp |
| PRKCQ-AS1:16 | chr10:6625767-6630342 | 661 bp |
| PRKCQ-AS1:17 | chr10:6625767-6657912 | 883 bp |
| PRKCQ-AS1:18 | chr10:6625767-6633094 | 661 bp |
| PRKCQ-AS1:19 | chr10:6625767-6633067 | 401 bp |
| PRKCQ-AS1:2 | chr10:6622361-6627665 | 918 bp |
| PRKCQ-AS1:20 | chr10:6625773-6633096 | 905 bp |
| PRKCQ-AS1:21 | chr10:6625793-6657871 | 767 bp |
| PRKCQ-AS1:22 | chr10:6625793-6657855 | 1132 bp |
| PRKCQ-AS1:23 | chr10:6625793-6657863 | 811 bp |
| PRKCQ-AS1:24 | chr10:6625823-6655865 | 757 bp |
| PRKCQ-AS1:25 | chr10:6628133-6629012 | 880 bp |
| PRKCQ-AS1:26 | chr10:6628186-6628882 | 697 bp |
| PRKCQ-AS1:27 | chr10:6632917-6657810 | 327 bp |
| PRKCQ-AS1:28 | chr10:6632924-6657409 | 300 bp |
| PRKCQ-AS1:29 | chr10:6649249-6657912 | 378 bp |
| PRKCQ-AS1:3 | chr10:6622381-6626261 | 1133 bp |
| PRKCQ-AS1:30 | chr10:6649283-6657921 | 531 bp |
| PRKCQ-AS1:31 | chr10:6650310-6658414 | 938 bp |
| PRKCQ-AS1:32 | chr10:6650338-6658359 | 587 bp |
| PRKCQ-AS1:33 | chr10:6657190-6658742 | 1504 bp |
| PRKCQ-AS1:34 | chr10:6657190-6657797 | 559 bp |
| PRKCQ-AS1:35 | chr10:6657388-6658273 | 680 bp |
| PRKCQ-AS1:36 | chr10:6622381-6626261 | 1133 bp |
| PRKCQ-AS1:37 | chr10:6622381-6664309 | 8613 bp |
| PRKCQ-AS1:38 | chr10:6622381-6664309 | 11636 bp |
| PRKCQ-AS1:39 | chr10:6622381-6625990 | 926 bp |
| PRKCQ-AS1:4 | chr10:6622387-6627323 | 2189 bp |
| PRKCQ-AS1:40 | chr10:6622381-6632388 | 7324 bp |
| PRKCQ-AS1:41 | chr10:6622468-6658791 | 5472 bp |
| PRKCQ-AS1:42 | chr10:6622468-6625693 | 556 bp |
| PRKCQ-AS1:43 | chr10:6622468-6626131 | 781 bp |
| PRKCQ-AS1:44 | chr10:6622468-6630699 | 2931 bp |
| PRKCQ-AS1:45 | chr10:6622468-6668648 | 4682 bp |
| PRKCQ-AS1:46 | chr10:6625619-6626260 | 443 bp |
| PRKCQ-AS1:47 | chr10:6625619-6627641 | 384 bp |
| PRKCQ-AS1:48 | chr10:6625619-6630342 | 809 bp |
| PRKCQ-AS1:49 | chr10:6625619-6633059 | 814 bp |
| PRKCQ-AS1:5 | chr10:6622387-6625990 | 920 bp |
| PRKCQ-AS1:50 | chr10:6660597-6663911 | 638 bp |
| PRKCQ-AS1:51 | chr10:6660678-6667308 | 499 bp |
| PRKCQ-AS1:52 | chr10:6660678-6667308 | 500 bp |
| PRKCQ-AS1:53 | chr10:6660678-6681743 | 3470 bp |
| PRKCQ-AS1:54 | chr10:6662507-6666266 | 1012 bp |
| PRKCQ-AS1:55 | chr10:6662976-6663911 | 400 bp |
| PRKCQ-AS1:56 | chr10:6667903-6668997 | 231 bp |
| PRKCQ-AS1:57 | chr10:6670024-6672982 | 315 bp |
| PRKCQ-AS1:6 | chr10:6622387-6627323 | 2253 bp |
| PRKCQ-AS1:7 | chr10:6622405-6629206 | 3855 bp |
| PRKCQ-AS1:8 | chr10:6622457-6626254 | 915 bp |
| PRKCQ-AS1:9 | chr10:6622470-6629063 | 3825 bp |
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| PRKCQ-AS1 | no | no | no | no |
Available literature
- Melo (2016), Long non-coding RNAs: biomarkers for acute leukaemia subtypes., Br. J. Haematol.
- Bannon (2015), Identification of long noncoding RNAs dysregulated in the midbrain of human cocaine abusers., J. Neurochem.
- Liu (2015), Expression Signatures of Long Noncoding RNAs in Adolescent Idiopathic Scoliosis., Biomed Res Int