Gene: lnc-CRYBA4-52
Basic information
LNCipedia gene ID: lnc-CRYBA4-52
Location (hg19): chr22:27042392-27247920
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA_gene
Transcripts: 90
Transcripts
Transcript ID | Location (hg19) | Length |
---|---|---|
lnc-CRYBA4-52:1 | chr22:27042392-27061841 | 962 bp |
lnc-CRYBA4-52:10 | chr22:27043188-27046821 | 3634 bp |
lnc-CRYBA4-52:11 | chr22:27043188-27061701 | 530 bp |
lnc-CRYBA4-52:12 | chr22:27043188-27061773 | 597 bp |
lnc-CRYBA4-52:13 | chr22:27043188-27061873 | 579 bp |
lnc-CRYBA4-52:14 | chr22:27043192-27061773 | 593 bp |
lnc-CRYBA4-52:15 | chr22:27053190-27061836 | 628 bp |
lnc-CRYBA4-52:16 | chr22:27053220-27061733 | 594 bp |
lnc-CRYBA4-52:17 | chr22:27053220-27062159 | 847 bp |
lnc-CRYBA4-52:18 | chr22:27053222-27061733 | 592 bp |
lnc-CRYBA4-52:19 | chr22:27053222-27061779 | 576 bp |
lnc-CRYBA4-52:2 | chr22:27042393-27061603 | 797 bp |
lnc-CRYBA4-52:20 | chr22:27053222-27061836 | 596 bp |
lnc-CRYBA4-52:21 | chr22:27053222-27061882 | 634 bp |
lnc-CRYBA4-52:22 | chr22:27053222-27061913 | 590 bp |
lnc-CRYBA4-52:23 | chr22:27053222-27061987 | 920 bp |
lnc-CRYBA4-52:24 | chr22:27053222-27062159 | 845 bp |
lnc-CRYBA4-52:25 | chr22:27053231-27061779 | 567 bp |
lnc-CRYBA4-52:26 | chr22:27053244-27061882 | 612 bp |
lnc-CRYBA4-52:27 | chr22:27053244-27061913 | 568 bp |
lnc-CRYBA4-52:28 | chr22:27053248-27061987 | 894 bp |
lnc-CRYBA4-52:29 | chr22:27053422-27062144 | 1041 bp |
lnc-CRYBA4-52:3 | chr22:27042393-27061841 | 961 bp |
lnc-CRYBA4-52:30 | :- | 10069 bp |
lnc-CRYBA4-52:31 | :- | 10110 bp |
lnc-CRYBA4-52:32 | :- | 9984 bp |
lnc-CRYBA4-52:33 | :- | 10184 bp |
lnc-CRYBA4-52:34 | :- | 10058 bp |
lnc-CRYBA4-52:35 | :- | 10143 bp |
lnc-CRYBA4-52:36 | :- | 9943 bp |
lnc-CRYBA4-52:37 | :- | 10069 bp |
lnc-CRYBA4-52:38 | chr22:27053552-27061816 | 590 bp |
lnc-CRYBA4-52:39 | chr22:27053552-27061816 | 590 bp |
lnc-CRYBA4-52:4 | :- | 3760 bp |
lnc-CRYBA4-52:40 | chr22:27053552-27062002 | 575 bp |
lnc-CRYBA4-52:41 | chr22:27053552-27062144 | 911 bp |
lnc-CRYBA4-52:42 | chr22:27053552-27072532 | 9416 bp |
lnc-CRYBA4-52:43 | chr22:27053553-27062002 | 574 bp |
lnc-CRYBA4-52:44 | chr22:27053575-27061643 | 507 bp |
lnc-CRYBA4-52:45 | chr22:27053575-27061643 | 507 bp |
lnc-CRYBA4-52:46 | chr22:27053575-27061757 | 575 bp |
lnc-CRYBA4-52:47 | chr22:27053578-27061757 | 572 bp |
lnc-CRYBA4-52:48 | chr22:27061452-27072914 | 10370 bp |
lnc-CRYBA4-52:49 | chr22:27062831-27063433 | 356 bp |
lnc-CRYBA4-52:5 | chr22:27042438-27046483 | 911 bp |
lnc-CRYBA4-52:50 | chr22:27063123-27072436 | 8467 bp |
lnc-CRYBA4-52:51 | chr22:27066036-27183224 | 4440 bp |
lnc-CRYBA4-52:52 | chr22:27068589-27176972 | 2015 bp |
lnc-CRYBA4-52:53 | chr22:27068646-27122759 | 665 bp |
lnc-CRYBA4-52:54 | chr22:27068701-27113448 | 483 bp |
lnc-CRYBA4-52:55 | chr22:27068730-27130418 | 918 bp |
lnc-CRYBA4-52:56 | chr22:27068740-27172811 | 658 bp |
lnc-CRYBA4-52:57 | chr22:27068746-27117987 | 587 bp |
lnc-CRYBA4-52:58 | chr22:27068753-27113422 | 584 bp |
lnc-CRYBA4-52:59 | chr22:27068753-27114355 | 658 bp |
lnc-CRYBA4-52:6 | chr22:27042604-27061603 | 586 bp |
lnc-CRYBA4-52:60 | chr22:27068753-27118135 | 1107 bp |
lnc-CRYBA4-52:61 | chr22:27068753-27130418 | 895 bp |
lnc-CRYBA4-52:62 | chr22:27068753-27143655 | 4614 bp |
lnc-CRYBA4-52:63 | chr22:27068753-27172811 | 645 bp |
lnc-CRYBA4-52:64 | chr22:27068753-27172845 | 615 bp |
lnc-CRYBA4-52:65 | chr22:27068753-27174598 | 775 bp |
lnc-CRYBA4-52:66 | chr22:27068753-27176170 | 1021 bp |
lnc-CRYBA4-52:67 | chr22:27068753-27187979 | 17225 bp |
lnc-CRYBA4-52:68 | chr22:27068753-27206055 | 33493 bp |
lnc-CRYBA4-52:69 | chr22:27068754-27113422 | 583 bp |
lnc-CRYBA4-52:7 | chr22:27042831-27072532 | 9390 bp |
lnc-CRYBA4-52:70 | chr22:27068768-27176170 | 1006 bp |
lnc-CRYBA4-52:71 | chr22:27068768-27174598 | 760 bp |
lnc-CRYBA4-52:72 | chr22:27068777-27172845 | 591 bp |
lnc-CRYBA4-52:73 | chr22:27068784-27089799 | 323 bp |
lnc-CRYBA4-52:74 | chr22:27068806-27176856 | 1682 bp |
lnc-CRYBA4-52:75 | chr22:27068819-27114355 | 592 bp |
lnc-CRYBA4-52:76 | chr22:27068849-27114949 | 1836 bp |
lnc-CRYBA4-52:77 | chr22:27068875-27176523 | 1220 bp |
lnc-CRYBA4-52:78 | chr22:27089721-27176138 | 691 bp |
lnc-CRYBA4-52:79 | chr22:27113215-27138801 | 459 bp |
lnc-CRYBA4-52:8 | chr22:27043175-27061701 | 543 bp |
lnc-CRYBA4-52:80 | chr22:27113222-27174635 | 608 bp |
lnc-CRYBA4-52:81 | chr22:27113332-27118135 | 706 bp |
lnc-CRYBA4-52:82 | chr22:27122620-27174541 | 451 bp |
lnc-CRYBA4-52:83 | chr22:27130461-27134094 | 717 bp |
lnc-CRYBA4-52:84 | chr22:27170136-27176769 | 1226 bp |
lnc-CRYBA4-52:85 | chr22:27172743-27176974 | 1433 bp |
lnc-CRYBA4-52:86 | chr22:27172795-27197466 | 277 bp |
lnc-CRYBA4-52:87 | chr22:27172854-27247920 | 327 bp |
lnc-CRYBA4-52:88 | chr22:27174417-27176309 | 595 bp |
lnc-CRYBA4-52:89 | chr22:27188219-27190341 | 2123 bp |
lnc-CRYBA4-52:9 | chr22:27043188-27061873 | 579 bp |
lnc-CRYBA4-52:90 | chr22:27232576-27238310 | 266 bp |
Locus conservation
Locus conservation? | ![]() |
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---|---|---|---|---|
lnc-CRYBA4-52 | no | no | no | no |
Available literature
- Briese (2016), Whole transcriptome profiling reveals the RNA content of motor axons., Nucleic Acids Res.
- Ichigozaki (2016), Serum long non-coding RNA, snoRNA host gene 5 level as a new tumor marker of malignant melanoma., Exp. Dermatol.
- Liao (2016), LncRNA MIAT: Myocardial infarction associated and more., Gene
- Rosa (2016), Long Noncoding RNA Regulation of Pluripotency., Stem Cells Int
- Cabili (2015), Localization and abundance analysis of human lncRNAs at single-cell and single-molecule resolution., Genome Biol.
- Fiedler (2015), Development of Long Noncoding RNA-Based Strategies to Modulate Tissue Vascularization., J. Am. Coll. Cardiol.
- Li (2015), Construction and analysis of lncRNA-lncRNA synergistic networks to reveal clinically relevant lncRNAs in cancer., Oncotarget
- Rao (2015), Genetic variants in long non-coding RNA MIAT contribute to risk of paranoid schizophrenia in a Chinese Han population., Schizophr. Res.
- Wang (2015), Identification of lncRNA-associated competing triplets reveals global patterns and prognostic markers for cancer., Nucleic Acids Res.
- Yan (2015), lncRNA-MIAT regulates microvascular dysfunction by functioning as a competing endogenous RNA., Circ. Res.
- Zhou (2015), Long non-coding MIAT mediates high glucose-induced renal tubular epithelial injury., Biochem. Biophys. Res. Commun.
- Barry (2014), The long non-coding RNA Gomafu is acutely regulated in response to neuronal activation and involved in schizophrenia-associated alternative splicing., Mol. Psychiatry
- Roberts (2014), The role of long non-coding RNAs in neurodevelopment, brain function and neurological disease., Philos. Trans. R. Soc. Lond., B, Biol. Sci.
- Skroblin (2014), "Going long": long non-coding RNAs as biomarkers., Circ. Res.
- Vausort (2014), Long noncoding RNAs in patients with acute myocardial infarction., Circ. Res.
- Abdelmohsen (2013), Senescence-associated lncRNAs: senescence-associated long noncoding RNAs., Aging Cell
- Hangauer (2013), Pervasive transcription of the human genome produces thousands of previously unidentified long intergenic noncoding RNAs., PLoS Genet.
- Zhang (2013), A long non-coding RNA signature in glioblastoma multiforme predicts survival., Neurobiol. Dis.
- Bánfai (2012), Long noncoding RNAs are rarely translated in two human cell lines., Genome Res.
- Derrien (2012), The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression., Genome Res.
- Ip (2012), Long non-coding RNAs in nuclear bodies., Dev. Growth Differ.
- Lin (2011), RNA-Seq of human neurons derived from iPS cells reveals candidate long non-coding RNAs involved in neurogenesis and neuropsychiatric disorders., PLoS ONE
- Tollervey (2011), Characterizing the RNA targets and position-dependent splicing regulation by TDP-43., Nat. Neurosci.
- Sone (2007), The mRNA-like noncoding RNA Gomafu constitutes a novel nuclear domain in a subset of neurons., J. Cell. Sci.
- Ishii (2006), Identification of a novel non-coding RNA, MIAT, that confers risk of myocardial infarction., J. Hum. Genet.