Transcript: AATBC:2

Basic information

LNCipedia transcript ID: AATBC:2 
LNCipedia gene ID: AATBC
Location (hg19): chr21:45234207-45238429
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2155 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT082460
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 73.9268 coding 
CPAT coding probability 75.22% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
AATBC:2 no no no no

Available literature

  1. Zhao (2015), Knockdown of a novel lincRNA AATBC suppresses proliferation and induces apoptosis in bladder cancer., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CSTB-1:13
4.0 AATBC:2
4.1 AATBC:2
5.0 AATBC:2
5.1 AATBC:2
5.2 AATBC:2