Transcript: ACTN1-AS1:2

Basic information

LNCipedia transcript ID: ACTN1-AS1:2 
LNCipedia gene ID: ACTN1-AS1
Location (hg19): chr14:69446487-69448265
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 741 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022542; NONHSAT037505
Alternative gene names: XLOC_010859; linc-EXD2-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -153.6326 non-coding 
CPAT coding probability 24.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ACTN1-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-EXD2-1:1
3.1 lnc-EXD2-1:2
4.0 ACTN1-AS1:2
4.1 ACTN1-AS1:2
5.0 ACTN1-AS1:2
5.1 ACTN1-AS1:2
5.2 ACTN1-AS1:2