Transcript: ADIRF-AS1:5

Basic information

LNCipedia transcript ID: ADIRF-AS1:5 
LNCipedia gene ID: ADIRF-AS1
Location (hg19): chr10:88725496-88729158
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 718 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000418273.1; RP11-96C23.8-001; OTTHUMT00000049176.1; NONHSAT015384
Alternative gene names: ENSG00000233165.1; RP11-96C23.8; OTTHUMG00000018661.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -33.9451 non-coding 
CPAT coding probability 4.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ADIRF-AS1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GLUD1-3:1
4.0 ADIRF-AS1:5
4.1 ADIRF-AS1:5
5.0 ADIRF-AS1:5
5.1 ADIRF-AS1:5
5.2 ADIRF-AS1:5