Transcript: ADNP-AS1:1

Basic information

LNCipedia transcript ID: ADNP-AS1:1 
LNCipedia gene ID: ADNP-AS1
Location (hg19): chr20:49547521-49561316
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 572 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000558899.1; RP5-914P20.5-001; OTTHUMT00000418978.1; NONHSAT080329
Alternative gene names: ENSG00000259456.1; RP5-914P20.5; OTTHUMG00000172534.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -178.8875 non-coding 
CPAT coding probability 2.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ADNP-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MOCS3-1:1
4.0 ADNP-AS1:1
4.1 ADNP-AS1:1
5.0 ADNP-AS1:1
5.1 ADNP-AS1:1
5.2 ADNP-AS1:1