Transcript: ADORA2A-AS1:2

Basic information

LNCipedia transcript ID: ADORA2A-AS1:2 
LNCipedia gene ID: ADORA2A-AS1
Location (hg19): chr22:24825178-24890783
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2568 bp
Exons: 7
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014
Alternative transcript names: NONHSAT084344; NR_028484; ENST00000543438.1
Alternative gene names: ENSG00000178803.6; ADORA2A-AS1; FLJ34651


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -118.0692 non-coding 
CPAT coding probability 46.69% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
ADORA2A-AS1:2 no no no no

Available literature

  1. Knowles (2009), Recent de novo origin of human protein-coding genes., Genome Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C22orf45-1:3
4.0 ADORA2A-AS1:2
4.1 ADORA2A-AS1:2
5.0 ADORA2A-AS1:2
5.1 ADORA2A-AS1:2
5.2 ADORA2A-AS1:2