Transcript: ADPGK-AS1:11

Basic information

LNCipedia transcript ID: ADPGK-AS1:11 
LNCipedia gene ID: ADPGK-AS1
Location (hg19): chr15:73076225-73079893
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 317 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260898.1|FTMT25900014502.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -263.1658 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ADPGK-AS1:11 yes no no no

Available literature

  1. Song (2018), LncRNA ADPGK-AS1 promotes pancreatic cancer progression through activating ZEB1-mediated epithelial-mesenchymal transition., Cancer Biol. Ther.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 ADPGK-AS1:11
5.0 ADPGK-AS1:11
5.1 ADPGK-AS1:11
5.2 ADPGK-AS1:11