Transcript: ALMS1-IT1:4

Basic information

LNCipedia transcript ID: ALMS1-IT1:4 
HGNC Gene Symbol: ALMS1-IT1    
HGNC Full Gene Name: ALMS1 intronic transcript 1
Ensembl Gene ID: ENSG00000230002
Ensembl Transcript ID: ENST00000441587
Location (hg19): chr2:73683891-73686609
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2105 bp
Exons: 2
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000441587.3
Alternative gene names: ENSG00000230002.3; ALMS1-IT1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -10.0962 non-coding 
CPAT coding probability 0.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ALMS1-IT1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 ALMS1-IT1:4
5.1 ALMS1-IT1:4
5.2 ALMS1-IT1:4