Transcript: ARHGAP5-AS1:3

Basic information

LNCipedia transcript ID: ARHGAP5-AS1:3 
LNCipedia gene ID: ARHGAP5-AS1
Location (hg19): chr14:32544625-32545999
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1375 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000553596.1; ARHGAP5-AS1-001; OTTHUMT00000409732.1; NONHSAT036298
Alternative gene names: ENSG00000258655.1; ARHGAP5-AS1; OTTHUMG00000170588.1; MGC15504


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -122.8755 non-coding 
CPAT coding probability 10.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ARHGAP5-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C14orf126-4:1
4.0 ARHGAP5-AS1:3
4.1 ARHGAP5-AS1:3
5.0 ARHGAP5-AS1:3
5.1 ARHGAP5-AS1:3
5.2 ARHGAP5-AS1:3