Transcript: ARHGEF19-AS1:1

Basic information

LNCipedia transcript ID: ARHGEF19-AS1:1 
HGNC Gene Symbol: ARHGEF19-AS1    
HGNC Full Gene Name: ARHGEF19 antisense RNA 1
Ensembl Gene ID: ENSG00000234166
Ensembl Transcript ID: ENST00000457809
Location (hg19): chr1:16524349-16524852
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 439 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000457809.1; ARHGEF19-AS1-001; OTTHUMT00000006294.1; NONHSAT001090
Alternative gene names: ENSG00000234166.1; ARHGEF19-AS1; OTTHUMG00000002220.1;

RNA sequence:


Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -154.2459 non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ARHGEF19-AS1:1 yes no no no

Available literature

  1. Yu (2015), Glucocorticoids Significantly Influence the Transcriptome of Bone Microvascular Endothelial Cells of Human Femoral Head., Chin. Med. J.

LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CLCNKB-4:1
4.0 ARHGEF19-AS1:1
4.1 ARHGEF19-AS1:1
5.0 ARHGEF19-AS1:1
5.1 ARHGEF19-AS1:1
5.2 ARHGEF19-AS1:1