Transcript: ARHGEF7-AS1:1

Basic information

LNCipedia transcript ID: ARHGEF7-AS1:1 
LNCipedia gene ID: ARHGEF7-AS1
RefSeq ID: NR_120398
Location (hg19): chr13:111800544-111805924
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4071 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120398; NR_120398.1
Alternative gene names: ; LOC101060553


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -42.9532 non-coding 
CPAT coding probability 16.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ARHGEF7-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRD10-3:4
4.0 ARHGEF7-AS1:1
4.1 ARHGEF7-AS1:1
5.0 ARHGEF7-AS1:1
5.1 ARHGEF7-AS1:1
5.2 ARHGEF7-AS1:1