Transcript: ARHGEF7-IT1:2

Basic information

LNCipedia transcript ID: ARHGEF7-IT1:2 
LNCipedia gene ID: ARHGEF7-IT1
Location (hg19): chr13:111774999-111797169
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1362 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT035204
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -115.3941 non-coding 
CPAT coding probability 12.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ARHGEF7-IT1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C13orf16-1:2
4.0 ARHGEF7-IT1:2
4.1 ARHGEF7-IT1:2
5.0 ARHGEF7-IT1:2
5.1 ARHGEF7-IT1:2
5.2 ARHGEF7-IT1:2