Transcript: ARNTL2-AS1:2

Basic information

LNCipedia transcript ID: ARNTL2-AS1:2 
LNCipedia gene ID: ARNTL2-AS1
RefSeq ID: NR_109975
Location (hg19): chr12:27542722-27599567
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 813 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_109975; NR_109975.1
Alternative gene names: ; ARNTL2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -268.4209 non-coding 
CPAT coding probability 8.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ARNTL2-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C12orf71-2:4
4.0 ARNTL2-AS1:2
4.1 ARNTL2-AS1:2
5.0 ARNTL2-AS1:2
5.1 ARNTL2-AS1:2
5.2 ARNTL2-AS1:2