Transcript: ARRDC1-AS1:5

Basic information

LNCipedia transcript ID: ARRDC1-AS1:5 
LNCipedia gene ID: ARRDC1-AS1
RefSeq ID: NR_122036
Location (hg19): chr9:140509784-140512981
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1180 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_122036; NR_122036.1
Alternative gene names: ; ARRDC1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -40.7844 non-coding 
CPAT coding probability 66.10% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
ARRDC1-AS1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C9orf37-2:3
4.0 ARRDC1-AS1:5
4.1 ARRDC1-AS1:5
5.0 ARRDC1-AS1:5
5.1 ARRDC1-AS1:5
5.2 ARRDC1-AS1:5