Transcript: ASB16-AS1:4

Basic information

LNCipedia transcript ID: ASB16-AS1:4 
HGNC Gene Symbol: ASB16-AS1    
HGNC Full Gene Name: ASB16 antisense RNA 1
Ensembl Gene ID: ENSG00000267080
Ensembl Transcript ID: ENST00000585457
Location (hg19): chr17:42253341-42264039
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2213 bp
Exons: 4
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000585457.1; ENST00000585457.5
Alternative gene names: ENSG00000267080.1; ASB16-AS1; ENSG00000267080.5; DKFZp762C2414


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 129.6469 coding 
CPAT coding probability 92.23% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
ASB16-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C17orf65-2:4
4.0 ASB16-AS1:4
4.1 ASB16-AS1:4
5.0 ASB16-AS1:4
5.1 ASB16-AS1:4
5.2 ASB16-AS1:4