Transcript: ASH1L-AS1:1

Basic information

LNCipedia transcript ID: ASH1L-AS1:1 
LNCipedia gene ID: ASH1L-AS1
RefSeq ID: NR_027023
Location (hg19): chr1:155531772-155533735
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1964 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT006742; NR_027023; NR_027023.1
Alternative gene names: ; ASH1L-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 22.8468 non-coding 
CPAT coding probability 99.45% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
ASH1L-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MSTO1-1:3
4.0 ASH1L-AS1:1
4.1 ASH1L-AS1:1
5.0 ASH1L-AS1:1
5.1 ASH1L-AS1:1
5.2 ASH1L-AS1:1