Transcript: ASH1L-AS1:4

Basic information

LNCipedia transcript ID: ASH1L-AS1:4 
HGNC Gene Symbol: ASH1L-AS1    
HGNC Full Gene Name: ASH1L antisense RNA 1
Ensembl Gene ID: ENSG00000235919
Ensembl Transcript ID: ENST00000452809
Location (hg19): chr1:155531864-155533735
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 909 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000452809; ENST00000452809.1; RP11-29H23.1-001; OTTHUMT00000039405.2; NONHSAT006744
Alternative gene names: ENSG00000235919; RP11-29H23.1; ENSG00000235919.2; OTTHUMG00000014012.2; ENSG00000235919.3; ASH1L-AS1; ENSG00000235919.4;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -111.2094 non-coding 
CPAT coding probability 75.20% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
ASH1L-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MSTO1-1:2
3.1 lnc-MSTO1-1:2
4.0 ASH1L-AS1:4
4.1 ASH1L-AS1:4
5.0 ASH1L-AS1:4
5.1 ASH1L-AS1:4
5.2 ASH1L-AS1:4