Transcript: ASH1L-IT1:1

Basic information

LNCipedia transcript ID: ASH1L-IT1:1 
HGNC Gene Symbol: ASH1L-IT1    
HGNC Full Gene Name: ASH1L intronic transcript 1
Ensembl Gene ID: ENSG00000227773
Ensembl Transcript ID: ENST00000458371
Location (hg19): chr1:155365801-155366769
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 448 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000458371.1; ASH1L-IT1-001; OTTHUMT00000039414.1; NONHSAT006736
Alternative gene names: ENSG00000227773.1; ASH1L-IT1; OTTHUMG00000014015.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -24.914 non-coding 
CPAT coding probability 0.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ASH1L-IT1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PKLR-2:1
4.0 ASH1L-IT1:1
4.1 ASH1L-IT1:1
5.0 ASH1L-IT1:1
5.1 ASH1L-IT1:1
5.2 ASH1L-IT1:1