Transcript: ATP2A1-AS1:8

Basic information

LNCipedia transcript ID: ATP2A1-AS1:8 
LNCipedia gene ID: ATP2A1-AS1
Location (hg19): chr16:28890142-28891237
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 659 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260442.1|FTMT26100009504.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -411.24 non-coding 
CPAT coding probability 6.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ATP2A1-AS1:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 ATP2A1-AS1:8
5.0 ATP2A1-AS1:8
5.1 ATP2A1-AS1:8
5.2 ATP2A1-AS1:8