Transcript: ATP6V1B1-AS1:1

Basic information

LNCipedia transcript ID: ATP6V1B1-AS1:1 
LNCipedia gene ID: ATP6V1B1-AS1
Location (hg19): chr2:71174670-71221879
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 423 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000453130.1; AC007040.11-001; OTTHUMT00000330332.3; NONHSAT071520
Alternative gene names: ENSG00000258881.1; AC007040.11; OTTHUMG00000129708.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 464.7469 coding 
CPAT coding probability 60.15% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
ATP6V1B1-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TEX261-1:1
4.0 ATP6V1B1-AS1:1
4.1 ATP6V1B1-AS1:1
5.0 ATP6V1B1-AS1:1
5.1 ATP6V1B1-AS1:1
5.2 ATP6V1B1-AS1:1