Transcript: BAALC-AS1:23

Basic information

LNCipedia transcript ID: BAALC-AS1:23 
LNCipedia gene ID: BAALC-AS1
Location (hg19): chr8:104255805-104310954
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4059 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000247081.3|MICT00000348988.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 11.1506 non-coding 
CPAT coding probability 3.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BAALC-AS1:23 no no no no

Available literature

  1. Chen (2018), LncFZD6 initiates Wnt/β-catenin and liver TIC self-renewal through BRG1-mediated FZD6 transcriptional activation., Oncogene


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 BAALC-AS1:23
5.0 BAALC-AS1:23
5.1 BAALC-AS1:23
5.2 BAALC-AS1:23