Transcript: BAALC-AS1:8

Basic information

LNCipedia transcript ID: BAALC-AS1:8 
LNCipedia gene ID: BAALC-AS1
Location (hg19): chr8:104255810-104310968
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3555 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1369:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -2.8213 non-coding 
CPAT coding probability 5.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BAALC-AS1:8 no no no no

Available literature

  1. Chen (2018), LncFZD6 initiates Wnt/β-catenin and liver TIC self-renewal through BRG1-mediated FZD6 transcriptional activation., Oncogene


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 BAALC-AS1:8
4.1 BAALC-AS1:8
5.0 BAALC-AS1:8
5.1 BAALC-AS1:8
5.2 BAALC-AS1:8