Transcript: BACH1-IT2:5

Basic information

LNCipedia transcript ID: BACH1-IT2:5 
LNCipedia gene ID: BACH1-IT2
RefSeq ID: NR_046564
Location (hg19): chr21:30744821-30746300
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 802 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_046564; NR_046564.2
Alternative gene names: ; BACH1-IT2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -121.0544 non-coding 
CPAT coding probability 1.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BACH1-IT2:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C21orf7-2:4
4.0 BACH1-IT2:5
4.1 BACH1-IT2:5
5.0 BACH1-IT2:5
5.1 BACH1-IT2:5
5.2 BACH1-IT2:5