Transcript: BEAN1-AS1:5

Basic information

LNCipedia transcript ID: BEAN1-AS1:5 
LNCipedia gene ID: BEAN1-AS1
RefSeq ID: NR_109960
Location (hg19): chr16:66503699-66510305
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 483 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_109960; NR_109960.1
Alternative gene names: ; BEAN1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -102.693 non-coding 
CPAT coding probability 39.81% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
BEAN1-AS1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TK2-1:8
4.0 BEAN1-AS1:5
4.1 BEAN1-AS1:5
5.0 BEAN1-AS1:5
5.1 BEAN1-AS1:5
5.2 BEAN1-AS1:5