Transcript: BFSP2-AS1:14

Basic information

LNCipedia transcript ID: BFSP2-AS1:14 
LNCipedia gene ID: BFSP2-AS1
RefSeq ID: NR_135276
Location (hg19): chr3:133155464-133209990
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1542 bp
Exons: 5
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135276.1
Alternative gene names: BFSP2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.3048 non-coding 
CPAT coding probability 44.94% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
BFSP2-AS1:14 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 BFSP2-AS1:14
5.1 BFSP2-AS1:14
5.2 BFSP2-AS1:14