Transcript: BHLHE40-AS1:4

Basic information

LNCipedia transcript ID: BHLHE40-AS1:4 
HGNC Gene Symbol: BHLHE40-AS1    
HGNC Full Gene Name: BHLHE40 antisense RNA 1
Ensembl Gene ID: ENSG00000235831
Ensembl Transcript ID: ENST00000615178
RefSeq ID: NR_125916
Location (hg19): chr3:4938493-5021646
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2215 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000615178.4; NR_125916.1
Alternative gene names: ENSG00000235831.6; BHLHE40-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 25.5686 non-coding 
CPAT coding probability 5.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BHLHE40-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 BHLHE40-AS1:4
4.1 BHLHE40-AS1:4
5.0 BHLHE40-AS1:4
5.1 BHLHE40-AS1:4
5.2 BHLHE40-AS1:4