Transcript: BMP7-AS1:3

Basic information

LNCipedia transcript ID: BMP7-AS1:3 
HGNC Gene Symbol: BMP7-AS1    
HGNC Full Gene Name: BMP7 antisense RNA 1
Ensembl Gene ID: ENSG00000235032
Ensembl Transcript ID: ENST00000445956
Location (hg19): chr20:55789928-55790922
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 436 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000445956.1; RP4-813D12.2-001; OTTHUMT00000079828.1; NONHSAT147174
Alternative gene names: ENSG00000235032.1; RP4-813D12.2; OTTHUMG00000032810.1; BMP7-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -93.7322 non-coding 
CPAT coding probability 18.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BMP7-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPO11-2:1
4.0 BMP7-AS1:3
4.1 BMP7-AS1:3
5.0 BMP7-AS1:3
5.1 BMP7-AS1:3
5.2 BMP7-AS1:3