Transcript: BSN-DT:14

Basic information

LNCipedia transcript ID: BSN-DT:14 
HGNC Gene Symbol: BSN-DT    
HGNC Full Gene Name: BSN divergent transcript
Ensembl Gene ID: ENSG00000226913
Ensembl Transcript ID: ENST00000433882
Location (hg19): chr3:49588728-49591773
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 566 bp
Exons: 3
Sources: Biogazelle lncRNA chip; Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000433882; TCONS_00005773; ENST00000433882.1; BSN-AS2-003; OTTHUMT00000346414.1; NONHSAT089708
Alternative gene names: ENSG00000226913; XLOC_003118; linc-NICN1-2; BSN-AS2; ENSG00000226913.1; OTTHUMG00000156881.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -147.0368 non-coding 
CPAT coding probability 4.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BSN-DT:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NICN1-1:2
3.1 lnc-NICN1-1:2
4.0 BSN-AS2:2
4.1 BSN-AS2:2
5.0 BSN-AS2:2
5.1 BSN-DT:3
5.2 BSN-DT:14