Transcript: BVES-AS1:11

Basic information

LNCipedia transcript ID: BVES-AS1:11 
LNCipedia gene ID: BVES-AS1
Location (hg19): chr6:105585162-105617709
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1401 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000203808.6|FTMT22300040520.1
Alternative gene names: bA99L11.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -54.9816 non-coding 
CPAT coding probability 4.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BVES-AS1:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 BVES-AS1:11
5.0 BVES-AS1:11
5.1 BVES-AS1:11
5.2 BVES-AS1:11