Transcript: C1RL-AS1:5

Basic information

LNCipedia transcript ID: C1RL-AS1:5 
LNCipedia gene ID: C1RL-AS1
Location (hg19): chr12:7262894-7275421
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3761 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT026232
Alternative gene names: MATL2963


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.8494 non-coding 
CPAT coding probability 4.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
C1RL-AS1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CLSTN3-1:7
4.0 C1RL-AS1:5
4.1 C1RL-AS1:5
5.0 C1RL-AS1:5
5.1 C1RL-AS1:5
5.2 C1RL-AS1:5