Transcript: C2-AS1:1

Basic information

LNCipedia transcript ID: C2-AS1:1 
HGNC Gene Symbol: C2-AS1    
HGNC Full Gene Name: C2 antisense RNA 1
Ensembl Gene ID: ENSG00000281756
Ensembl Transcript ID: ENST00000630806
RefSeq ID: NR_104191
Location (hg19): chr6:31902251-31909501
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 762 bp
Exons: 3
Sources: Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_104191; ENST00000630806.1; NR_104191.1
Alternative gene names: ENSG00000281756.1; C2-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.1219 non-coding 
CPAT coding probability 4.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
C2-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RDBP-1:1
4.0 C2-AS1:1
4.1 C2-AS1:1
5.0 C2-AS1:1
5.1 C2-AS1:1
5.2 C2-AS1:1