Transcript: C5orf64-AS1:11

Basic information

LNCipedia transcript ID: C5orf64-AS1:11 
LNCipedia gene ID: C5orf64-AS1
RefSeq ID: NR_105000
Location (hg19): chr5:61028617-61031525
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1181 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_105000; NR_105000.1
Alternative gene names: LOC100506526


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -206.0929 non-coding 
CPAT coding probability 5.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
C5orf64-AS1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C5orf43-5:7
4.0 lnc-C5orf43-5:7
4.1 lnc-C5orf43-5:7
5.0 lnc-C5orf43-5:7
5.1 C5orf64-AS1:4
5.2 C5orf64-AS1:11