Transcript: C8orf34-AS1:3

Basic information

LNCipedia transcript ID: C8orf34-AS1:3 
LNCipedia gene ID: C8orf34-AS1
Location (hg19): chr8:69214472-69216749
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2278 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT127093
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -30.7273 non-coding 
CPAT coding probability 0.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
C8orf34-AS1:3 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-664D7.4.1-4:3
4.0 C8orf34-AS1:3
4.1 C8orf34-AS1:3
5.0 C8orf34-AS1:3
5.1 C8orf34-AS1:3
5.2 C8orf34-AS1:3