Transcript: C8orf37-AS1:7

Basic information

LNCipedia transcript ID: C8orf37-AS1:7 
LNCipedia gene ID: C8orf37-AS1
RefSeq ID: NR_038205
Location (hg19): chr8:96281064-96822371
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 219 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT127833; NR_038205; NR_038205.1
Alternative gene names: tospeak; C8orf37-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -133.1021 non-coding 
CPAT coding probability 6.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
C8orf37-AS1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PLEKHF2-2:8
4.0 C8orf37-AS1:7
4.1 C8orf37-AS1:7
5.0 C8orf37-AS1:7
5.1 C8orf37-AS1:7
5.2 C8orf37-AS1:7