Transcript: CA3-AS1:5

Basic information

LNCipedia transcript ID: CA3-AS1:5 
LNCipedia gene ID: CA3-AS1
Location (hg19): chr8:86354387-86375942
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 428 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT127529
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 2.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CA3-AS1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CA1-1:4
4.0 CA3-AS1:5
4.1 CA3-AS1:5
5.0 CA3-AS1:5
5.1 CA3-AS1:5
5.2 CA3-AS1:5