Transcript: CA3-AS1:9

Basic information

LNCipedia transcript ID: CA3-AS1:9 
LNCipedia gene ID: CA3-AS1
RefSeq ID: NR_121633
Location (hg19): chr8:86368716-86375283
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 566 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_121633; NR_121633.1
Alternative gene names: ; CA3-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -156.9862 non-coding 
CPAT coding probability 0.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CA3-AS1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CA1-1:9
4.0 CA3-AS1:9
4.1 CA3-AS1:9
5.0 CA3-AS1:9
5.1 CA3-AS1:9
5.2 CA3-AS1:9