Transcript: CACNA1C-AS4:1

Basic information

LNCipedia transcript ID: CACNA1C-AS4:1 
LNCipedia gene ID: CACNA1C-AS4
RefSeq ID: NR_046578
Location (hg19): chr12:2329703-2332647
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 737 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT025449; NR_046578; NR_046578.1
Alternative gene names: ; CACNA1C-AS4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -83.7571 non-coding 
CPAT coding probability 14.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CACNA1C-AS4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DCP1B-2:2
4.0 CACNA1C-AS4:1
4.1 CACNA1C-AS4:1
5.0 CACNA1C-AS4:1
5.1 CACNA1C-AS4:1
5.2 CACNA1C-AS4:1