Transcript: CACNA2D3-AS1:2

Basic information

LNCipedia transcript ID: CACNA2D3-AS1:2 
LNCipedia gene ID: CACNA2D3-AS1
Location (hg19): chr3:54908632-54935282
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2078 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000243715.1|ENST00000471265.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -61.0329 non-coding 
CPAT coding probability 0.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CACNA2D3-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 CACNA2D3-AS1:2
5.0 CACNA2D3-AS1:2
5.1 CACNA2D3-AS1:2
5.2 CACNA2D3-AS1:2