Transcript: CCDC18-AS1:56

Basic information

LNCipedia transcript ID: CCDC18-AS1:56 
LNCipedia gene ID: CCDC18-AS1
Location (hg19): chr1:93804252-93811347
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 911 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000223745.3|ENST00000452347.1
Alternative gene names: ENST00000440778.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -85.1555 non-coding 
CPAT coding probability 0.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CCDC18-AS1:56 no no no no

Available literature

  1. Liu (2015), Expression Signatures of Long Noncoding RNAs in Adolescent Idiopathic Scoliosis., Biomed Res Int


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 CCDC18-AS1:56
5.0 CCDC18-AS1:56
5.1 CCDC18-AS1:56
5.2 CCDC18-AS1:56