Transcript: CCND2-AS1:2

Basic information

LNCipedia transcript ID: CCND2-AS1:2 
LNCipedia gene ID: CCND2-AS1
RefSeq ID: NR_125790
Location (hg19): chr12:4357933-4385350
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 553 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125790; NR_125790.1
Alternative gene names: ; CCND2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 46.6252 non-coding 
CPAT coding probability 11.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
CCND2-AS1:2 yes no no no

Available literature

  1. Zhang (2017), Highly expressed lncRNA CCND2-AS1 promotes glioma cell proliferation through Wnt/β-catenin signaling., Biochem. Biophys. Res. Commun.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FGF23-2:2
4.0 CCND2-AS1:2
4.1 CCND2-AS1:2
5.0 CCND2-AS1:2
5.1 CCND2-AS1:2
5.2 CCND2-AS1:2