Transcript: CCNT2-AS1:9

Basic information

LNCipedia transcript ID: CCNT2-AS1:9 
LNCipedia gene ID: CCNT2-AS1
Location (hg19): chr2:135624632-135676176
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 976 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000537615.1; AC016725.4-201
Alternative gene names: ENSG00000224043.3; AC016725.4; OTTHUMG00000154855.2; CCNT2-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -243.2706 non-coding 
CPAT coding probability 5.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CCNT2-AS1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-YSK4-1:4
4.0 CCNT2-AS1:9
4.1 CCNT2-AS1:9
5.0 CCNT2-AS1:9
5.1 CCNT2-AS1:9
5.2 CCNT2-AS1:9